IEEE

Multiscale Binarization of Gene Expression Data for Reconstructing Boolean Networks

Abstract: Network inference algorithms can assist life scientists in unraveling gene-regulatory systems on a molecular level. In recent years, great attention has been drawn to the reconstruction of ...
GitHub

using torch.sym_not cause Z3Exception: Symbolic expressions cannot be cast to concrete Boolean values.

PYTORCH_TEST_WITH_ASAN=1 PYTORCH_TEST_WITH_UBSAN=1 python test/dynamo/test_dynamic_shapes.py DynamicShapesReproTests.test_issue175_dynamic_shapes File "/home/lsakka ...
GitHub

geppy: a gene expression programming framework in Python

Gene Expression Programming (GEP) is a popular and established evolutionary algorithm for automatic generation of computer programs and mathematical models. It has found wide applications in symbolic ...
C&EN

GeneORator: An Effective Strategy for Navigating Protein Sequence Space More Efficiently through Boolean OR-Type DNA Libraries

Manchester Centre for Synthetic Biology of Fine and Speciality Chemicals (SYNBIOCHEM), Manchester Institute of Biotechnology, The University of Manchester, Manchester M1 7DN, United Kingdom School of ...
C&EN

Interaction of Bare dSpCas9, Scaffold gRNA, and Type II Anti-CRISPR Proteins Highly Favors the Control of Gene Expression in the Yeast S. cerevisiae

Taken together, the results presented here indicate that dSpCas9-based activation does not benefit from a high expression level of sgRNA, which is also consistent with the findings of previous studies ...